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Phet - Interactive Science SimulationsThe website http://phet.colorado.edu hosts a large number of java-based educational simulations teaching chemistry, physics, math, biology and earth science. |
The simulations can be run directly in your own web browser as a Java applet, or downloaded.
Physics simulations include wave interference, radio waves and electromagnetic fields, nuclear fission, friction, microwaves and alpha decay to only name a few.
In the chemistry section of the site, you can find online simulations on gas properties, models of the hydrogen atom, salts and solubility and much more.
Several simulations have been translated into a number of languages. See the translations page for a full list.

A projectile motion simulation in Java on the Phet website.

Pump the handle to experiment with gas properties in this Java sim.